EnhancerDB
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  3. rs572482446[chr1:172866907]
Enhancers that have rs572482446[chr1:172866907]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs572482446[chr1:172866907]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172866779 172867319 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350397
chr1 172866896 172866908 PKNOX1 JASPAR yes 33162850
chr1 172866896 172866908 PKNOX2 JASPAR yes 33162851
chr1 172866896 172866908 TGIF1 JASPAR yes 33162852
chr1 172866896 172866908 TGIF2 JASPAR yes 33162853
chr1 172866897 172866907 FIGLA JASPAR yes 33162855
chr1 172866897 172866907 ID4 JASPAR yes 33162856
chr1 172866897 172866907 TCF3 JASPAR yes 33162857
chr1 172866897 172866907 TCF4 JASPAR yes 33162858
chr1 172866900 172866908 TBX15 JASPAR yes 33162859
chr1 172866900 172866908 TBX1 JASPAR yes 33162860
chr1 172866900 172866908 TBX4 JASPAR yes 33162861
chr1 172866900 172866908 TBX5 JASPAR yes 33162862
chr1 172866900 172866913 SMAD2 JASPAR yes 33162863
Genes associated with rs572482446[chr1:172866907], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More