EnhancerDB
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  3. rs572484916[chr16:1332862]
Enhancers that have rs572484916[chr16:1332862]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs572484916[chr16:1332862]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1329860 1335538 TCF7L2 GTRD no Colon (HCT116) 21684409
chr16 1330900 1333590 ZNF274 GTRD no Cervix (HeLa-S3) 21684434
chr16 1331384 1334313 TCF7L2 GTRD no Colon (HCT116) 21684450
chr16 1331593 1335283 TCF7L2 GTRD no Colon (HCT116) 21684468
chr16 1331653 1335053 TCF7L2 GTRD no Colon (HCT116) 21684476
chr16 1331665 1335207 TCF7L2 GTRD no Colon (HCT116) 21684480
chr16 1331764 1335175 TCF7L2 GTRD no Colon (HCT116) 21684486
chr16 1332720 1333655 ZNF274 GTRD no Liver (HepG2) 21684494
chr16 1332787 1334935 TCF7L2 GTRD no Colon (HCT116) 21684495
chr16 1332791 1334859 TCF7L2 GTRD no Colon (HCT116) 21684496
chr16 1332832 1335182 TCF7L2 GTRD no Colon (HCT116) 21684497
chr16 1332852 1332873 IRF1 JASPAR yes 9147569
chr16 1332857 1332872 MEF2A JASPAR yes 9147570
chr16 1332857 1332878 IRF1 JASPAR yes 9147571
chr16 1332858 1332873 FOXP1 JASPAR yes 9147572
chr16 1332858 1332873 MEF2C JASPAR yes 9147573
chr16 1332858 1332879 IRF1 JASPAR yes 9147574
chr16 1332859 1332871 FOXC2 JASPAR yes 9147575
chr16 1332859 1332871 MEF2A JASPAR yes 9147576
chr16 1332859 1332871 MEF2B JASPAR yes 9147577
chr16 1332859 1332871 MEF2D JASPAR yes 9147578
chr16 1332860 1332870 MEF2A JASPAR yes 9147579
chr16 1332861 1332865 YY1 TRANSFAC yes 9147580
chr16 1332862 1332876 IRF7 JASPAR yes 9147581
Genes associated with rs572484916[chr16:1332862], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More