EnhancerDB
  1. Home
  2. SNP
  3. rs572500834[chr17:70428940]
Enhancers that have rs572500834[chr17:70428940]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs572500834[chr17:70428940]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70428856 70429216 ZNF274 GTRD no Liver (HepG2) 21785164
chr17 70428930 70428941 FOXP2 JASPAR yes 55787862
chr17 70428930 70428942 FOXC2 JASPAR yes 55787863
chr17 70428930 70428944 FOXF2 JASPAR yes 55787864
chr17 70428931 70428942 FOXB1 JASPAR yes 55787868
chr17 70428931 70428942 FOXC1 JASPAR yes 55787869
chr17 70428932 70428943 FOXA1 JASPAR yes 55787876
Genes associated with rs572500834[chr17:70428940], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More