EnhancerDB
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  3. rs572516196[chr1:25792816]
Enhancers that have rs572516196[chr1:25792816]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25791765 25810575 enh156
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Large Intestine Ovary Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs572516196[chr1:25792816]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25792801 25792817 POU4F2 JASPAR yes 27577391
chr1 25792801 25792817 POU4F3 JASPAR yes 27577392
chr1 25792802 25792817 FOXA1 JASPAR yes 27577394
chr1 25792803 25792817 POU4F1 JASPAR yes 27577396
chr1 25792803 25792818 FOXP1 JASPAR yes 27577397
chr1 25792803 25792818 HNF1A JASPAR yes 27577398
chr1 25792804 25792816 FOXC2 JASPAR yes 27577399
chr1 25792804 25792818 ONECUT2 JASPAR yes 27577400
chr1 25792804 25792818 ONECUT3 JASPAR yes 27577401
chr1 25792805 25792816 FOXB1 JASPAR yes 27577402
chr1 25792805 25792816 FOXC1 JASPAR yes 27577403
chr1 25792805 25792816 PROP1 JASPAR yes 27577404
chr1 25792806 25792821 FOXA1 JASPAR yes 27577406
chr1 25792807 25792819 FOXI1 JASPAR yes 27577407
chr1 25792807 25792822 FOXP1 JASPAR yes 27577408
chr1 25792808 25792820 FOXC2 JASPAR yes 27577409
chr1 25792808 25792822 FOXF2 JASPAR yes 27577410
chr1 25792808 25792822 ONECUT2 JASPAR yes 27577411
chr1 25792808 25792822 ONECUT3 JASPAR yes 27577412
chr1 25792809 25792820 FOXB1 JASPAR yes 27577413
chr1 25792809 25792820 FOXC1 JASPAR yes 27577414
chr1 25792810 25792825 MEF2A JASPAR yes 27577416
chr1 25792811 25792826 MEF2C JASPAR yes 27577417
chr1 25792814 25792818 YY1 TRANSFAC yes 27577418
Genes associated with rs572516196[chr1:25792816], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More