EnhancerDB
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  3. rs572530002[chr1:2223151]
Enhancers that have rs572530002[chr1:2223151]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2213745 2234616 enh11425
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs572530002[chr1:2223151]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2223137 2223152 ZIC3 JASPAR yes 26232592
chr1 2223137 2223152 ZIC4 JASPAR yes 26232593
chr1 2223137 2223153 GLIS1 JASPAR yes 26232594
chr1 2223138 2223152 GLIS2 JASPAR yes 26232595
chr1 2223138 2223152 GLIS3 JASPAR yes 26232596
chr1 2223142 2223152 ZNF740 JASPAR yes 26232597
chr1 2223144 2223155 NFKB1 JASPAR yes 26232598
chr1 2223144 2223157 NFKB1 JASPAR yes 26232599
chr1 2223145 2223156 NFKB1 JASPAR yes 26232600
chr1 2223147 2223152 SP1 TRANSFAC yes 26232601
chr1 2223147 2223161 PLAG1 JASPAR yes 26232602
chr1 2223150 2223161 EBF1 JASPAR yes 26232603
chr1 2223150 2223163 TFAP2A JASPAR yes 26232604
chr1 2223150 2223163 TFAP2B JASPAR yes 26232605
chr1 2223150 2223163 TFAP2C JASPAR yes 26232606
chr1 2223151 2223163 TFAP2A JASPAR yes 26232607
chr1 2223151 2223163 TFAP2B JASPAR yes 26232608
chr1 2223151 2223163 TFAP2C JASPAR yes 26232609
chr1 2223151 2223166 TFAP2C JASPAR yes 26232610
Genes associated with rs572530002[chr1:2223151], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More