-
Home
- SNP
- rs572540745[chr1:220690415]
Enhancers that have rs572540745[chr1:220690415]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
220682589 |
220692299 |
enh12685 |
|
|
Transcript factors that have rs572540745[chr1:220690415]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
220690106
|
220690585
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
21381754
|
|
|
chr1
|
220690134
|
220690582
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
21381755
|
|
|
chr1
|
220690406
|
220690421
|
SCRT1
|
JASPAR
|
yes
|
|
35499867
|
|
|
chr1
|
220690407
|
220690419
|
GRHL1
|
JASPAR
|
yes
|
|
35499868
|
|
|
chr1
|
220690414
|
220690429
|
RUNX2
|
JASPAR
|
yes
|
|
35499869
|
|
Genes associated with rs572540745[chr1:220690415], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |