EnhancerDB
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  3. rs572559513[chr1:205447396]
Enhancers that have rs572559513[chr1:205447396]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205444631 205456855 enh61954
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Stomach Muscle (A673) Colon (HCT116) Breast Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs572559513[chr1:205447396]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205446941 205447411 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21371877
chr1 205446943 205447447 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371878
chr1 205446950 205447480 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371879
chr1 205447094 205449923 ZNF274 GTRD no Bone Marrow (K562) 107862187
chr1 205447331 205448235 TCF7L2 GTRD no Colon (HCT116) 21371883
chr1 205447368 205448725 ZNF274 GTRD no Cervix (HeLa-S3) 21371884
chr1 205447372 205448010 TCF7L2 GTRD no Colon (HCT116) 21371885
chr1 205447385 205447400 AR JASPAR yes 34762887
chr1 205447385 205447402 NR3C2 JASPAR yes 34762888
chr1 205447389 205447404 FOXA1 JASPAR yes 34762889
chr1 205447391 205447404 POU3F3 JASPAR yes 34762890
chr1 205447391 205447405 POU1F1 JASPAR yes 34762891
chr1 205447392 205447403 FOXB1 JASPAR yes 34762892
chr1 205447392 205447404 POU3F1 JASPAR yes 34762893
chr1 205447392 205447404 POU3F2 JASPAR yes 34762894
chr1 205447396 205447410 RORA JASPAR yes 34762895
Genes associated with rs572559513[chr1:205447396], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More