EnhancerDB
  1. Home
  2. SNP
  3. rs572601890[chr1:31972929]
Enhancers that have rs572601890[chr1:31972929]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31947645 31983179 enh198
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs572601890[chr1:31972929]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31972920 31972934 PLAG1 JASPAR yes 27934912
chr1 31972923 31972934 TFAP2A JASPAR yes 27934913
chr1 31972923 31972934 TFAP2B JASPAR yes 27934914
chr1 31972923 31972934 TFAP2C JASPAR yes 27934915
chr1 31972924 31972933 TFAP2A JASPAR yes 27934916
chr1 31972929 31972943 TCF7L2 JASPAR yes 27934917
chr1 31972929 31972944 LEF1 JASPAR yes 27934918
Genes associated with rs572601890[chr1:31972929], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More