EnhancerDB
  1. Home
  2. SNP
  3. rs572615271[chr16:389244]
Enhancers that have rs572615271[chr16:389244]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs572615271[chr16:389244]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 389115 389859 ZNF274 GTRD no Bone Marrow (K562) 21683988
chr16 389115 389859 ZNF274 GTRD no Bone Marrow (K562) 108170425
chr16 389232 389245 SMAD2 JASPAR yes 9106941
chr16 389235 389245 TBR1 JASPAR yes 9106942
chr16 389236 389246 TBX21 JASPAR yes 9106943
chr16 389237 389245 MGA JASPAR yes 9106944
chr16 389237 389245 TBX15 JASPAR yes 9106945
chr16 389237 389245 TBX1 JASPAR yes 9106946
chr16 389237 389245 TBX4 JASPAR yes 9106947
chr16 389237 389245 TBX5 JASPAR yes 9106948
chr16 389237 389246 ZEB1 JASPAR yes 9106949
chr16 389237 389249 PKNOX1 JASPAR yes 9106950
chr16 389237 389249 TGIF1 JASPAR yes 9106951
chr16 389237 389250 ZBTB18 JASPAR yes 9106952
chr16 389238 389248 FIGLA JASPAR yes 9106953
chr16 389238 389248 ID4 JASPAR yes 9106954
chr16 389238 389248 TCF3 JASPAR yes 9106955
chr16 389238 389248 TCF4 JASPAR yes 9106956
chr16 389239 389248 SNAI2 JASPAR yes 9106957
chr16 389240 389245 USF2 TRANSFAC yes 9106958
Genes associated with rs572615271[chr16:389244], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More