EnhancerDB
  1. Home
  2. SNP
  3. rs572740828[chr1:235265948]
Enhancers that have rs572740828[chr1:235265948]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235261105 235271828 enh998
Skin (Keratinocyte) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs572740828[chr1:235265948]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235265941 235265951 RORA JASPAR yes 36352592
chr1 235265942 235265953 ESRRA JASPAR yes 36352593
chr1 235265942 235265953 ESRRB JASPAR yes 36352594
chr1 235265944 235265952 NR4A2 JASPAR yes 36352595
chr1 235265946 235265950 ESR1 TRANSFAC yes 36352596
Genes associated with rs572740828[chr1:235265948], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More