EnhancerDB
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  3. rs572800025[chr16:29612850]
Enhancers that have rs572800025[chr16:29612850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29603958 29628535 enh3968
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs572800025[chr16:29612850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29611112 29613730 ZNF274 GTRD no Bone Marrow (K562) 21702676
chr16 29612412 29614034 ZNF143 GTRD no Epithelial (MCF-7) 21702694
chr16 29612420 29614189 TCF7L2 GTRD no Colon (HCT116) 21702695
chr16 29612447 29614063 ZNF274 GTRD no Cervix (HeLa-S3) 21702696
chr16 29612455 29614260 ZNF274 GTRD no Bone Marrow (K562) 21702697
chr16 29612461 29614172 ZNF274 GTRD no Bone Marrow (K562) 21702698
chr16 29612488 29612922 ZBTB33 GTRD no Brain (SK-N-SH) 21702699
chr16 29612563 29614180 ZNF274 GTRD no Bone Marrow (K562) 21702700
chr16 29612584 29614179 ZNF274 GTRD no Bone Marrow (K562) 21702702
chr16 29612586 29614179 ZNF274 GTRD no Bone Marrow (K562) 21702703
chr16 29612590 29614234 ZBTB33 GTRD no Lung (A549) 21702704
chr16 29612599 29614171 ZBTB33 GTRD no Brain (SK-N-SH) 21702705
chr16 29612603 29614037 ZNF274 GTRD no Bone Marrow (K562) 21702706
chr16 29612607 29614169 ZNF143 GTRD no Epithelial (MCF-7) 21702707
chr16 29612616 29612971 ZNF274 GTRD no Cervix (HeLa-S3) 21702708
chr16 29612622 29614206 ZNF143 GTRD no Epithelial (MCF-7) 21702709
chr16 29612635 29614323 TCF7L2 GTRD no Colon (HCT116) 21702711
chr16 29612639 29614175 TCF7L2 GTRD no Colon (HCT116) 21702712
chr16 29612644 29614189 ZNF274 GTRD no Bone Marrow (K562) 21702713
chr16 29612664 29614067 ZNF143 GTRD no Epithelial (MCF-7) 21702714
chr16 29612669 29613037 ZNF274 GTRD no Bone Marrow (K562) 21702715
chr16 29612681 29614340 TCF7L2 GTRD no Colon (HCT116) 21702716
chr16 29612685 29614073 TCF7L2 GTRD no Colon (HCT116) 21702717
chr16 29612786 29614102 ZBTB33 GTRD no Lung (A549) 21702718
chr16 29612797 29614188 ZNF274 GTRD no Bone Marrow (K562) 21702719
chr16 29612799 29614272 TCF7L2 GTRD no Colon (HCT116) 21702720
chr16 29612808 29614002 ZNF274 GTRD no Bone Marrow (K562) 21702721
chr16 29612823 29614192 TCF7L2 GTRD no Colon (HCT116) 21702722
chr16 29612831 29613154 ZNF274 GTRD no Bone Marrow (K562) 21702723
chr16 29612839 29612854 TFAP2A JASPAR yes 10267022
chr16 29612842 29612853 TFAP2B JASPAR yes 10267023
chr16 29612842 29612854 TFAP2A JASPAR yes 10267024
chr16 29612842 29612854 TFAP2B JASPAR yes 10267025
chr16 29612842 29612854 TFAP2C JASPAR yes 10267026
chr16 29612846 29613284 ZNF274 GTRD no Bone Marrow (K562) 21702724
chr16 29612850 29612858 RHOXF1 JASPAR yes 10267027
Genes associated with rs572800025[chr16:29612850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More