EnhancerDB
  1. Home
  2. SNP
  3. rs572811060[chr17:55674904]
Enhancers that have rs572811060[chr17:55674904]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572811060[chr17:55674904]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55674894 55674912 ESR2 JASPAR yes 54973269
chr17 55674895 55674910 ESR2 JASPAR yes 54973270
chr17 55674897 55674908 USF1 JASPAR yes 54973271
chr17 55674897 55674908 USF2 JASPAR yes 54973272
chr17 55674898 55674908 SREBF1 JASPAR yes 54973273
chr17 55674898 55674908 SREBF2 JASPAR yes 54973274
chr17 55674898 55674908 TFEB JASPAR yes 54973275
chr17 55674898 55674909 USF1 JASPAR yes 54973276
chr17 55674900 55674905 USF2 TRANSFAC yes 54973277
chr17 55674900 55674913 NR2F1 JASPAR yes 54973278
Genes associated with rs572811060[chr17:55674904], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More