EnhancerDB
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  3. rs57283658[chr19:3345775]
Enhancers that have rs57283658[chr19:3345775]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3331365 3352459 enh17861
Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs57283658[chr19:3345775]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3343589 3345870 TCF7L2 GTRD no Colon (HCT116) 21838749
chr19 3343589 3345870 TCF7L2 GTRD no Colon (HCT116) 108365537
chr19 3343665 3345784 TCF7L2 GTRD no Colon (HCT116) 21838755
chr19 3343665 3345784 TCF7L2 GTRD no Colon (HCT116) 108365563
chr19 3344644 3345854 TCF7L2 GTRD no Colon (HCT116) 21838786
chr19 3345328 3346021 TCF7L2 GTRD no Colon (HCT116) 21838791
chr19 3345359 3345979 TCF7L2 GTRD no Colon (HCT116) 21838792
chr19 3345775 3345786 USF1 JASPAR yes 112122004
chr19 3345775 3345786 USF2 JASPAR yes 112122005
Genes associated with rs57283658[chr19:3345775], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More