EnhancerDB
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  3. rs572865619[chr17:39692653]
Enhancers that have rs572865619[chr17:39692653]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39688905 39708275 enh17150
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs572865619[chr17:39692653]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39692094 39692664 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21757647
chr17 39692094 39692664 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108258643
chr17 39692202 39692672 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21757648
chr17 39692202 39692672 GATA3 UCSC Txn Factor no Conserved 108258644
chr17 39692202 39692672 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108258645
chr17 39692647 39692658 NFKB1 JASPAR yes 54262171
chr17 39692648 39692659 NFKB1 JASPAR yes 54262172
chr17 39692652 39692662 ZNF740 JASPAR yes 54262173
chr17 39692652 39692666 GLIS2 JASPAR yes 54262174
chr17 39692652 39692666 ZIC1 JASPAR yes 54262175
chr17 39692652 39692667 ZIC3 JASPAR yes 54262176
chr17 39692652 39692667 ZIC4 JASPAR yes 54262177
chr17 39692653 39692663 ZNF740 JASPAR yes 54262178
Genes associated with rs572865619[chr17:39692653], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More