EnhancerDB
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  3. rs572898454[chr1:28500184]
Enhancers that have rs572898454[chr1:28500184]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28493545 28502817 enh184
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Epithelial (MCF-7)
chr1 28500052 28500411 vista994
VISTA
Transcript factors that have rs572898454[chr1:28500184]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28500167 28500188 ZNF263 JASPAR yes 27749949
chr1 28500167 28500188 ZNF263 JASPAR yes 118262455
chr1 28500172 28500186 SPI1 JASPAR yes 27749950
chr1 28500172 28500186 SPI1 JASPAR yes 118262456
chr1 28500176 28500186 SP1 JASPAR yes 27749951
chr1 28500176 28500186 SP1 JASPAR yes 118262457
chr1 28500176 28500197 ZNF263 JASPAR yes 27749952
chr1 28500176 28500197 ZNF263 JASPAR yes 118262458
chr1 28500177 28500184 CEBPA TRANSFAC yes 27749953
chr1 28500177 28500184 CEBPA TRANSFAC yes 118262459
chr1 28500179 28500189 MZF1 JASPAR yes 27749954
chr1 28500179 28500189 SP1 JASPAR yes 27749955
chr1 28500179 28500189 ZNF740 JASPAR yes 27749956
chr1 28500179 28500189 MZF1 JASPAR yes 118262460
chr1 28500179 28500189 SP1 JASPAR yes 118262461
chr1 28500179 28500189 ZNF740 JASPAR yes 118262462
chr1 28500180 28500190 ZNF740 JASPAR yes 27749957
chr1 28500180 28500190 ZNF740 JASPAR yes 118262463
chr1 28500184 28500191 SP1 TRANSFAC yes 27749958
chr1 28500184 28500191 SP1 TRANSFAC yes 118262464
chr1 28500184 28500194 SP1 JASPAR yes 27749959
chr1 28500184 28500194 SP1 JASPAR yes 118262465
Genes associated with rs572898454[chr1:28500184], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More