EnhancerDB
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  3. rs572955602[chr2:39318921]
Enhancers that have rs572955602[chr2:39318921]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39316774 39331447 enh5437
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs572955602[chr2:39318921]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39318920 39318929 THAP1 JASPAR yes 73180571
chr2 39318920 39318931 GCM1 JASPAR yes 73180572
chr2 39318921 39318931 GCM2 JASPAR yes 73180573
Genes associated with rs572955602[chr2:39318921], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More