EnhancerDB
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  3. rs572972089[chr2:25500198]
Enhancers that have rs572972089[chr2:25500198]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25490985 25504661 enh18356
Brain (SK-N-SH) Blood (GM12878) Muscle (A673) Placenta Uterus Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Blood (T-cell)
chr2 25499637 25500641 vista30721
VISTA
Transcript factors that have rs572972089[chr2:25500198]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25500050 25500673 CTCF UCSC Txn Factor no Conserved 108431370
chr2 25500163 25500425 RAD21 UCSC Txn Factor no Conserved 108431371
chr2 25500186 25500199 NFKB1 JASPAR yes 22019632
chr2 25500186 25500199 NFKB2 JASPAR yes 22019633
chr2 25500186 25500199 NFKB1 JASPAR yes 72460700
chr2 25500186 25500199 NFKB2 JASPAR yes 72460701
chr2 25500187 25500198 NFKB1 JASPAR yes 22019635
chr2 25500187 25500198 NFKB1 JASPAR yes 72460703
Genes associated with rs572972089[chr2:25500198], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More