EnhancerDB
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  3. rs573055344[chr17:80236412]
Enhancers that have rs573055344[chr17:80236412]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs573055344[chr17:80236412]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80236037 80237798 TCF7L2 GTRD no Colon (HCT116) 21798502
chr17 80236104 80237724 TCF7L2 GTRD no Colon (HCT116) 21798504
chr17 80236142 80237713 TCF7L2 GTRD no Colon (HCT116) 21798505
chr17 80236326 80237672 ZNF143 GTRD no Epithelial (MCF-7) 21798506
chr17 80236381 80237714 TCF7L2 GTRD no Colon (HCT116) 21798507
chr17 80236400 80236421 ZNF263 JASPAR yes 56356567
chr17 80236401 80236422 ZNF263 JASPAR yes 56356568
chr17 80236408 80236429 ZNF263 JASPAR yes 56356569
Genes associated with rs573055344[chr17:80236412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More