EnhancerDB
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  3. rs573098620[chr17:79398717]
Enhancers that have rs573098620[chr17:79398717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79375645 79405275 enh17444
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs573098620[chr17:79398717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79398644 79399215 ZNF274 GTRD no Liver (HepG2) 21797976
chr17 79398644 79399215 ZNF274 GTRD no Liver (HepG2) 108309616
chr17 79398692 79399191 ZNF274 GTRD no Liver (HepG2) 21797977
chr17 79398692 79399191 ZNF274 GTRD no Liver (HepG2) 108309617
chr17 79398701 79398721 RREB1 JASPAR yes 56326906
chr17 79398703 79398718 RUNX2 JASPAR yes 56326907
chr17 79398705 79398725 RREB1 JASPAR yes 56326908
chr17 79398708 79398728 RREB1 JASPAR yes 56326909
chr17 79398710 79398730 RREB1 JASPAR yes 56326910
chr17 79398714 79398725 TBX20 JASPAR yes 56326911
chr17 79398715 79398723 MGA JASPAR yes 56326912
chr17 79398715 79398735 RREB1 JASPAR yes 56326913
chr17 79398717 79398732 RUNX2 JASPAR yes 56326914
Genes associated with rs573098620[chr17:79398717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More