EnhancerDB
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  3. rs573162180[chr12:96589490]
Enhancers that have rs573162180[chr12:96589490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 96589359 96589977 vista14551
VISTA
Transcript factors that have rs573162180[chr12:96589490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96589018 96589554 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108053067
chr12 96589096 96589496 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053068
chr12 96589105 96589645 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108053069
chr12 96589120 96589710 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053070
chr12 96589221 96589737 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053072
chr12 96589229 96589665 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053073
chr12 96589236 96589672 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053074
chr12 96589258 96589668 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053075
chr12 96589261 96589781 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053076
chr12 96589267 96589683 RELA UCSC Txn Factor no Conserved 108053077
chr12 96589269 96589649 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053078
chr12 96589279 96589719 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053079
chr12 96589281 96589645 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053080
chr12 96589285 96589721 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108053081
chr12 96589289 96589645 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21567594
chr12 96589289 96589645 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108053082
chr12 96589291 96589695 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567595
chr12 96589291 96589695 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053083
chr12 96589295 96589565 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21567596
chr12 96589295 96589565 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108053084
chr12 96589296 96589672 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567597
chr12 96589296 96589672 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053085
chr12 96589299 96589629 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053086
chr12 96589304 96589768 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21567598
chr12 96589304 96589768 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108053087
chr12 96589310 96589640 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567599
chr12 96589310 96589640 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053088
chr12 96589320 96589636 EBF1 UCSC Txn Factor no Conserved 108053089
chr12 96589321 96589717 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567600
chr12 96589321 96589717 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053090
chr12 96589324 96589680 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053091
chr12 96589333 96589717 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567601
chr12 96589333 96589717 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053092
chr12 96589337 96589649 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053093
chr12 96589339 96589663 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053094
chr12 96589340 96589620 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053095
chr12 96589341 96589717 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21567602
chr12 96589341 96589717 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108053096
chr12 96589356 96589616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053097
chr12 96589358 96589694 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108053098
chr12 96589359 96589663 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053099
chr12 96589359 96589669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053100
chr12 96589360 96589680 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053101
chr12 96589361 96589651 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053102
chr12 96589361 96589671 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21567603
chr12 96589361 96589671 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108053103
chr12 96589362 96589544 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053104
chr12 96589362 96589632 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053105
chr12 96589368 96589688 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567604
chr12 96589368 96589688 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053106
chr12 96589368 96589688 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108053107
chr12 96589375 96589655 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053108
chr12 96589380 96589664 RUNX3 UCSC Txn Factor no Conserved 108053109
chr12 96589380 96589664 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053110
chr12 96589395 96589616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053111
chr12 96589401 96589605 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053112
chr12 96589403 96589643 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053113
chr12 96589403 96589687 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053114
chr12 96589406 96589636 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053115
chr12 96589414 96589589 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053116
chr12 96589415 96589601 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053117
chr12 96589424 96589527 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053118
chr12 96589424 96589546 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053119
chr12 96589438 96589579 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053120
chr12 96589444 96589598 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21567605
chr12 96589444 96589598 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108053121
chr12 96589447 96589548 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053122
chr12 96589453 96589588 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053123
chr12 96589459 96589605 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053124
chr12 96589490 96589500 GBX1 JASPAR yes 82460443
chr12 96589490 96589500 GBX2 JASPAR yes 82460444
chr12 96589490 96589500 GBX1 JASPAR yes 123045411
chr12 96589490 96589500 GBX2 JASPAR yes 123045412
Genes associated with rs573162180[chr12:96589490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More