EnhancerDB
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  3. rs573196197[chr17:70429710]
Enhancers that have rs573196197[chr17:70429710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs573196197[chr17:70429710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70429705 70429715 NFATC3 JASPAR yes 55788030
chr17 70429705 70429720 FOXP1 JASPAR yes 55788031
chr17 70429707 70429714 NFATC2 JASPAR yes 55788032
chr17 70429708 70429722 STAT1 JASPAR yes 55788033
chr17 70429708 70429726 IRF2 JASPAR yes 55788034
Genes associated with rs573196197[chr17:70429710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More