EnhancerDB
  1. Home
  2. SNP
  3. rs573198606[chr17:54865070]
Enhancers that have rs573198606[chr17:54865070]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54855245 54867175 enh32239
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Colon (HCT116) Breast Peripheral Blood (MM.1S) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs573198606[chr17:54865070]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54863804 54865128 ZNF274 GTRD no Bone Marrow (K562) 21773119
chr17 54863804 54865128 ZNF274 GTRD no Bone Marrow (K562) 108273253
chr17 54863956 54865181 ZNF274 GTRD no Bone Marrow (K562) 21773120
chr17 54863956 54865181 ZNF274 GTRD no Bone Marrow (K562) 108273255
chr17 54863956 54866254 ZNF274 GTRD no Bone Marrow (K562) 21773121
chr17 54863956 54866254 ZNF274 GTRD no Bone Marrow (K562) 108273256
chr17 54864026 54865919 ZNF274 GTRD no Bone Marrow (K562) 21773122
chr17 54864026 54865919 ZNF274 GTRD no Bone Marrow (K562) 108273260
chr17 54864320 54865305 ZNF274 GTRD no Bone Marrow (K562) 21773134
chr17 54864320 54865305 ZNF274 GTRD no Bone Marrow (K562) 108273277
chr17 54864467 54865086 ZNF274 GTRD no Bone Marrow (K562) 21773155
chr17 54864467 54865086 ZNF274 GTRD no Bone Marrow (K562) 108273315
chr17 54864666 54865088 ZNF274 GTRD no Bone Marrow (K562) 21773165
chr17 54864666 54865088 ZNF274 GTRD no Bone Marrow (K562) 108273335
chr17 54865055 54865070 NFYB JASPAR yes 54913227
chr17 54865057 54865073 NFYA JASPAR yes 54913228
chr17 54865059 54865079 RREB1 JASPAR yes 54913229
Genes associated with rs573198606[chr17:54865070], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More