EnhancerDB
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  3. rs573219838[chr1:172882781]
Enhancers that have rs573219838[chr1:172882781]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 172882769 172883147 vista3925
VISTA
Transcript factors that have rs573219838[chr1:172882781]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172882070 172886039 ZNF274 GTRD no Bone Marrow (K562) 107846255
chr1 172882220 172883137 ZNF143 GTRD no Epithelial (MCF-7) 21350436
chr1 172882220 172883137 ZNF143 GTRD no Epithelial (MCF-7) 107846256
chr1 172882778 172882781 MYB TRANSFAC yes 33165413
chr1 172882778 172882781 MYB TRANSFAC yes 118400595
Genes associated with rs573219838[chr1:172882781], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More