EnhancerDB
  1. Home
  2. SNP
  3. rs573243402[chr16:88272751]
Enhancers that have rs573243402[chr16:88272751]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs573243402[chr16:88272751]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88272257 88272801 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735577
chr16 88272520 88272860 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735586
chr16 88272522 88272986 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21735587
chr16 88272532 88272852 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735588
chr16 88272582 88272858 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735589
chr16 88272588 88272956 ZNF143 GTRD no Epithelial (MCF-7) 21735590
chr16 88272745 88272765 RREB1 JASPAR yes 12269498
chr16 88272747 88272757 GCM2 JASPAR yes 12269499
Genes associated with rs573243402[chr16:88272751], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More