EnhancerDB
  1. Home
  2. SNP
  3. rs573246942[chr16:81661522]
Enhancers that have rs573246942[chr16:81661522]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 81653149 81684095 enh16840
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
chr16 81661281 81661650 vista23146
VISTA
Transcript factors that have rs573246942[chr16:81661522]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 81660792 81661550 P63 GTRD no Skin (Keratinocyte) 108209854
chr16 81660792 81661550 P63 GTRD no Skin (Keratinocyte) 108209855
chr16 81660809 81661962 TCF7L2 GTRD no Colon (HCT116) 21717700
chr16 81660809 81661962 TCF7L2 GTRD no Colon (HCT116) 108209856
chr16 81660809 81661962 TCF7L2 GTRD no Colon (HCT116) 108209857
chr16 81660837 81662060 TCF7L2 GTRD no Colon (HCT116) 21717702
chr16 81660837 81662060 TCF7L2 GTRD no Colon (HCT116) 108209860
chr16 81660837 81662060 TCF7L2 GTRD no Colon (HCT116) 108209861
chr16 81660872 81661849 ZNF143 GTRD no Epithelial (MCF-7) 21717703
chr16 81660872 81661849 ZNF143 GTRD no Epithelial (MCF-7) 108209864
chr16 81660872 81661849 ZNF143 GTRD no Epithelial (MCF-7) 108209865
chr16 81660878 81661634 P63 GTRD no Skin (Keratinocyte) 108209866
chr16 81660878 81661634 P63 GTRD no Skin (Keratinocyte) 108209867
chr16 81660890 81661827 ZNF143 GTRD no Epithelial (MCF-7) 21717704
chr16 81660890 81661827 ZNF143 GTRD no Epithelial (MCF-7) 108209868
chr16 81660890 81661827 ZNF143 GTRD no Epithelial (MCF-7) 108209869
chr16 81660900 81661954 TCF7L2 GTRD no Colon (HCT116) 21717705
chr16 81660900 81661954 TCF7L2 GTRD no Colon (HCT116) 108209870
chr16 81660900 81661954 TCF7L2 GTRD no Colon (HCT116) 108209871
chr16 81661509 81661523 PLAG1 JASPAR yes 11852339
chr16 81661509 81661523 PLAG1 JASPAR yes 49400656
chr16 81661520 81661533 NFKB1 JASPAR yes 11852340
chr16 81661520 81661533 NFKB1 JASPAR yes 49400657
chr16 81661521 81661532 NFKB1 JASPAR yes 11852341
chr16 81661521 81661532 NFKB1 JASPAR yes 49400658
chr16 81661522 81661527 ETS2 TRANSFAC yes 11852342
chr16 81661522 81661527 ETS2 TRANSFAC yes 49400659
chr16 81661522 81661532 RELA JASPAR yes 11852343
chr16 81661522 81661532 RELA JASPAR yes 49400660
Genes associated with rs573246942[chr16:81661522], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More