EnhancerDB
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  3. rs573256617[chr5:171602308]
Enhancers that have rs573256617[chr5:171602308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr5 171602273 171602685 vista50130
VISTA
Transcript factors that have rs573256617[chr5:171602308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171602198 171602926 POLR2A UCSC Txn Factor no Conserved 108537436
chr5 171602303 171602317 E2F7 JASPAR yes 67771566
chr5 171602303 171602317 E2F7 JASPAR yes 70760858
chr5 171602305 171602315 ZNF740 JASPAR yes 67771567
chr5 171602305 171602315 ZNF740 JASPAR yes 70760859
chr5 171602308 171602329 ZNF263 JASPAR yes 67771568
chr5 171602308 171602329 ZNF263 JASPAR yes 70760860
Genes associated with rs573256617[chr5:171602308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More