EnhancerDB
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  3. rs573270933[chr16:88360552]
Enhancers that have rs573270933[chr16:88360552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88359920 88374013 enh32028
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs573270933[chr16:88360552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88360374 88360941 TCF7L2 GTRD no Colon (HCT116) 21736024
chr16 88360385 88361035 TCF7L2 GTRD no Colon (HCT116) 21736025
chr16 88360552 88360556 NFE TRANSFAC yes 12278943
chr16 88360552 88360565 SMAD2 JASPAR yes 12278944
Genes associated with rs573270933[chr16:88360552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More