EnhancerDB
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  3. rs573305660[chr19:4815472]
Enhancers that have rs573305660[chr19:4815472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4796225 4815632 enh17875
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Uterus Heart
Transcript factors that have rs573305660[chr19:4815472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4814652 4816592 ZNF274 GTRD no Cervix (HeLa-S3) 21842372
chr19 4814741 4817080 ZNF143 GTRD no Epithelial (MCF-7) 21842373
chr19 4814755 4816988 ZNF143 GTRD no Epithelial (MCF-7) 21842374
chr19 4814807 4816188 ZNF274 GTRD no Cervix (HeLa-S3) 21842375
chr19 4814867 4815772 TCF7L2 GTRD no Colon (HCT116) 21842376
chr19 4814989 4816178 TCF7L2 GTRD no Colon (HCT116) 21842377
chr19 4815004 4815923 TCF7L2 GTRD no Colon (HCT116) 21842378
chr19 4815107 4815690 TCF7L2 GTRD no Colon (HCT116) 21842379
chr19 4815262 4816554 ZNF143 GTRD no Epithelial (MCF-7) 21842380
chr19 4815311 4817408 TCF7L2 GTRD no Colon (HCT116) 21842381
chr19 4815320 4816233 ZNF143 GTRD no Epithelial (MCF-7) 21842382
chr19 4815359 4816225 TCF7L2 GTRD no Colon (HCT116) 21842383
chr19 4815382 4816258 ZNF143 GTRD no Epithelial (MCF-7) 21842384
chr19 4815399 4816236 TCF7L2 GTRD no Colon (HCT116) 21842385
chr19 4815418 4816321 ZNF143 GTRD no Epithelial (MCF-7) 21842386
chr19 4815447 4816553 ZNF143 GTRD no Epithelial (MCF-7) 21842387
chr19 4815451 4816233 ZNF143 GTRD no Epithelial (MCF-7) 21842388
chr19 4815468 4815479 BATF JASPAR yes 112193094
chr19 4815470 4815935 TCF7L2 GTRD no Colon (HCT116) 21842389
chr19 4815470 4816057 ZNF143 GTRD no Epithelial (MCF-7) 21842390
Genes associated with rs573305660[chr19:4815472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More