EnhancerDB
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  3. rs573315700[chr16:1340131]
Enhancers that have rs573315700[chr16:1340131]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs573315700[chr16:1340131]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1337318 1340439 ZNF143 GTRD no Epithelial (MCF-7) 21684538
chr16 1337318 1340439 ZNF143 GTRD no Epithelial (MCF-7) 108171312
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 21684544
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171314
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171315
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171316
chr16 1339499 1340766 ZNF274 GTRD no Blood (GM12878) 108171331
chr16 1340014 1340165 ZNF274 GTRD no Liver (HepG2) 21684580
chr16 1340045 1340269 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21684581
chr16 1340127 1340138 TFAP2A JASPAR yes 9148551
chr16 1340127 1340138 TFAP2B JASPAR yes 9148552
chr16 1340127 1340138 TFAP2C JASPAR yes 9148553
Genes associated with rs573315700[chr16:1340131], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More