EnhancerDB
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  3. rs573340275[chr1:15528847]
Enhancers that have rs573340275[chr1:15528847]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs573340275[chr1:15528847]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15528838 15528857 CTCF JASPAR yes 26970289
chr1 15528843 15528852 SNAI2 JASPAR yes 26970290
chr1 15528844 15528849 USF2 TRANSFAC yes 26970291
Genes associated with rs573340275[chr1:15528847], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More