EnhancerDB
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  3. rs573454540[chr16:19705293]
Enhancers that have rs573454540[chr16:19705293]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 19704325 19714695 enh16595
Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs573454540[chr16:19705293]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 19705275 19705296 IRF1 JASPAR yes 9876770
chr16 19705276 19705297 IRF1 JASPAR yes 9876772
chr16 19705277 19705298 IRF1 JASPAR yes 9876774
chr16 19705278 19705293 FOXP1 JASPAR yes 9876775
chr16 19705278 19705299 IRF1 JASPAR yes 9876776
chr16 19705279 19705294 FOXP1 JASPAR yes 9876777
chr16 19705279 19705300 IRF1 JASPAR yes 9876778
chr16 19705280 19705295 FOXP1 JASPAR yes 9876779
chr16 19705280 19705301 IRF1 JASPAR yes 9876780
chr16 19705281 19705296 FOXP1 JASPAR yes 9876781
chr16 19705281 19705302 IRF1 JASPAR yes 9876782
chr16 19705282 19705297 FOXP1 JASPAR yes 9876783
chr16 19705282 19705303 IRF1 JASPAR yes 9876784
chr16 19705283 19705298 FOXP1 JASPAR yes 9876785
chr16 19705283 19705304 IRF1 JASPAR yes 9876786
chr16 19705284 19705299 FOXP1 JASPAR yes 9876787
chr16 19705286 19705301 FOXP1 JASPAR yes 9876788
chr16 19705287 19705308 IRF1 JASPAR yes 9876789
chr16 19705288 19705303 FOXP1 JASPAR yes 9876790
chr16 19705289 19705310 IRF1 JASPAR yes 9876791
Genes associated with rs573454540[chr16:19705293], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More