EnhancerDB
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  3. rs573679081[chr16:88298414]
Enhancers that have rs573679081[chr16:88298414]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs573679081[chr16:88298414]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88296962 88299423 P63 GTRD no Skin (Keratinocyte) 108221871
chr16 88296991 88299886 P63 GTRD no Skin (Keratinocyte) 108221872
chr16 88297053 88298418 TCF7L2 GTRD no Colon (HCT116) 21735677
chr16 88297998 88298484 TCF7L2 GTRD no Colon (HCT116) 21735680
chr16 88298035 88298568 TCF7L2 GTRD no Colon (HCT116) 21735681
chr16 88298292 88298474 ZBTB33 GTRD no Brain (SK-N-SH) 21735682
chr16 88298410 88298424 GLIS2 JASPAR yes 12271817
chr16 88298410 88298424 GLIS3 JASPAR yes 12271818
chr16 88298410 88298425 ZIC3 JASPAR yes 12271819
chr16 88298410 88298425 ZIC4 JASPAR yes 12271820
chr16 88298414 88298420 SP1 TRANSFAC yes 12271821
chr16 88298414 88298424 SP1 JASPAR yes 12271822
Genes associated with rs573679081[chr16:88298414], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More