EnhancerDB
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  3. rs573849926[chr16:88348379]
Enhancers that have rs573849926[chr16:88348379]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88327201 88357367 enh16902
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus
Transcript factors that have rs573849926[chr16:88348379]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88348076 88348861 ZBTB33 GTRD no Lung (A549) 21736001
chr16 88348080 88348425 CTCF GTRD no Spleen 21736002
chr16 88348189 88348882 ZBTB33 GTRD no Lung (A549) 21736003
chr16 88348275 88348841 ZBTB33 GTRD no Lung (A549) 21736004
chr16 88348283 88348719 ZBTB33 GTRD no Lung (A549) 21736005
chr16 88348375 88348379 YY1 TRANSFAC yes 12277575
chr16 88348379 88348389 ALX3 JASPAR yes 12277576
chr16 88348379 88348389 EMX1 JASPAR yes 12277577
chr16 88348379 88348389 HOXB2 JASPAR yes 12277578
chr16 88348379 88348389 HOXB3 JASPAR yes 12277579
chr16 88348379 88348389 MEOX2 JASPAR yes 12277580
chr16 88348379 88348389 MNX1 JASPAR yes 12277581
Genes associated with rs573849926[chr16:88348379], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More