EnhancerDB
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  3. rs573859872[chr16:373653]
Enhancers that have rs573859872[chr16:373653]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs573859872[chr16:373653]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 21683784
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170123
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170124
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 21683785
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 108170125
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 108170126
chr16 373645 373657 HES7 JASPAR yes 9104416
chr16 373645 373657 PKNOX1 JASPAR yes 9104417
chr16 373645 373657 PKNOX2 JASPAR yes 9104418
chr16 373645 373657 TGIF2 JASPAR yes 9104419
chr16 373646 373655 SNAI2 JASPAR yes 9104420
chr16 373646 373656 HEY2 JASPAR yes 9104421
chr16 373646 373656 ID4 JASPAR yes 9104422
chr16 373646 373656 TCF4 JASPAR yes 9104423
Genes associated with rs573859872[chr16:373653], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More