EnhancerDB
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  3. rs573955803[chr2:235333424]
Enhancers that have rs573955803[chr2:235333424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235326485 235339375 enh19342
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs573955803[chr2:235333424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235333414 235333435 IRF1 JASPAR yes 81876363
chr2 235333415 235333436 IRF1 JASPAR yes 81876364
chr2 235333416 235333437 IRF1 JASPAR yes 81876365
chr2 235333417 235333432 FOXP1 JASPAR yes 81876366
chr2 235333417 235333438 IRF1 JASPAR yes 81876367
chr2 235333419 235333434 FOXP1 JASPAR yes 81876368
chr2 235333420 235333435 FOXP1 JASPAR yes 81876369
chr2 235333421 235333436 FOXP1 JASPAR yes 81876370
chr2 235333422 235333437 FOXP1 JASPAR yes 81876371
chr2 235333423 235333438 FOXP1 JASPAR yes 81876372
chr2 235333424 235333439 FOXP1 JASPAR yes 81876373
Genes associated with rs573955803[chr2:235333424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More