EnhancerDB
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  3. rs573965340[chr6:41686343]
Enhancers that have rs573965340[chr6:41686343]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 41686086 41686432 vista51931
VISTA
Transcript factors that have rs573965340[chr6:41686343]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41686336 41686354 RARA JASPAR yes 70363268
chr6 41686336 41686354 RARA JASPAR yes 101668856
Genes associated with rs573965340[chr6:41686343], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More