EnhancerDB
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  3. rs574018540[chr16:1332313]
Enhancers that have rs574018540[chr16:1332313]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs574018540[chr16:1332313]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1329860 1335538 TCF7L2 GTRD no Colon (HCT116) 21684409
chr16 1329991 1332722 ZNF143 GTRD no Epithelial (MCF-7) 21684415
chr16 1330511 1332778 ZNF143 GTRD no Epithelial (MCF-7) 21684429
chr16 1330900 1333590 ZNF274 GTRD no Cervix (HeLa-S3) 21684434
chr16 1331049 1332501 ZNF274 GTRD no Liver (HepG2) 21684436
chr16 1331157 1332742 ZNF274 GTRD no Liver (HepG2) 21684439
chr16 1331208 1332785 ZNF274 GTRD no Liver (HepG2) 21684440
chr16 1331273 1332800 ZNF274 GTRD no Liver (HepG2) 21684442
chr16 1331283 1332438 ZNF143 GTRD no Epithelial (MCF-7) 21684443
chr16 1331289 1332455 ZNF274 GTRD no Cervix (HeLa-S3) 21684444
chr16 1331333 1332756 ZNF274 GTRD no Liver (HepG2) 21684447
chr16 1331384 1334313 TCF7L2 GTRD no Colon (HCT116) 21684450
chr16 1331394 1332763 ZNF274 GTRD no Liver (HepG2) 21684451
chr16 1331402 1332386 ZNF143 GTRD no Epithelial (MCF-7) 21684452
chr16 1331458 1332426 ZNF143 GTRD no Epithelial (MCF-7) 21684453
chr16 1331512 1332435 ZNF143 GTRD no Epithelial (MCF-7) 21684456
chr16 1331524 1332352 ZNF143 GTRD no Epithelial (MCF-7) 21684457
chr16 1331553 1332704 ZNF274 GTRD no Liver (HepG2) 21684461
chr16 1331557 1332324 ZNF274 GTRD no Liver (HepG2) 21684462
chr16 1331561 1332736 TCF7L2 GTRD no Colon (HCT116) 21684463
chr16 1331593 1335283 TCF7L2 GTRD no Colon (HCT116) 21684468
chr16 1331600 1332846 ZNF274 GTRD no Liver (HepG2) 21684470
chr16 1331637 1332721 ZNF274 GTRD no Liver (HepG2) 21684474
chr16 1331653 1335053 TCF7L2 GTRD no Colon (HCT116) 21684476
chr16 1331665 1335207 TCF7L2 GTRD no Colon (HCT116) 21684480
chr16 1331743 1332488 ZNF143 GTRD no Epithelial (MCF-7) 21684485
chr16 1331764 1335175 TCF7L2 GTRD no Colon (HCT116) 21684486
chr16 1331766 1332732 ZNF143 GTRD no Epithelial (MCF-7) 21684487
chr16 1331883 1332322 TCF7L2 GTRD no Colon (HCT116) 21684491
chr16 1332307 1332322 FOXP1 JASPAR yes 9147483
chr16 1332307 1332328 IRF1 JASPAR yes 9147484
chr16 1332308 1332323 FOXP1 JASPAR yes 9147485
chr16 1332308 1332329 IRF1 JASPAR yes 9147486
chr16 1332309 1332324 FOXP1 JASPAR yes 9147487
Genes associated with rs574018540[chr16:1332313], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More