EnhancerDB
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  3. rs574079906[chr1:2226851]
Enhancers that have rs574079906[chr1:2226851]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2213745 2234616 enh11425
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs574079906[chr1:2226851]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2226394 2230712 TCF7L2 GTRD no Colon (HCT116) 107801818
chr1 2226395 2235066 ZNF274 GTRD no Bone Marrow (K562) 107801819
chr1 2226395 2235066 ZNF274 GTRD no Bone Marrow (K562) 107801820
chr1 2226842 2226856 POU1F1 JASPAR yes 26233029
chr1 2226843 2226855 POU3F2 JASPAR yes 26233030
chr1 2226843 2226856 POU3F3 JASPAR yes 26233031
chr1 2226848 2226865 ZNF410 JASPAR yes 26233032
chr1 2226851 2226862 CDX2 JASPAR yes 26233033
Genes associated with rs574079906[chr1:2226851], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More