EnhancerDB
  1. Home
  2. SNP
  3. rs574129220[chr1:90422288]
Enhancers that have rs574129220[chr1:90422288]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90404665 90425035 enh485
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs574129220[chr1:90422288]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90422279 90422289 SREBF1 JASPAR yes 30638677
chr1 90422279 90422289 SREBF2 JASPAR yes 30638678
Genes associated with rs574129220[chr1:90422288], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More