EnhancerDB
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  3. rs574254664[chr16:88298370]
Enhancers that have rs574254664[chr16:88298370]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs574254664[chr16:88298370]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88296962 88299423 P63 GTRD no Skin (Keratinocyte) 108221871
chr16 88296991 88299886 P63 GTRD no Skin (Keratinocyte) 108221872
chr16 88297053 88298418 TCF7L2 GTRD no Colon (HCT116) 21735677
chr16 88297998 88298484 TCF7L2 GTRD no Colon (HCT116) 21735680
chr16 88298035 88298568 TCF7L2 GTRD no Colon (HCT116) 21735681
chr16 88298292 88298474 ZBTB33 GTRD no Brain (SK-N-SH) 21735682
chr16 88298364 88298372 TBX5 JASPAR yes 12271806
chr16 88298364 88298373 ZEB1 JASPAR yes 12271807
chr16 88298365 88298375 ID4 JASPAR yes 12271808
chr16 88298365 88298375 NHLH1 JASPAR yes 12271809
chr16 88298365 88298375 TCF3 JASPAR yes 12271810
chr16 88298365 88298375 TCF4 JASPAR yes 12271811
chr16 88298366 88298375 SNAI2 JASPAR yes 12271812
chr16 88298367 88298372 USF2 TRANSFAC yes 12271813
Genes associated with rs574254664[chr16:88298370], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More