EnhancerDB
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  3. rs574429789[chr1:228966238]
Enhancers that have rs574429789[chr1:228966238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs574429789[chr1:228966238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228965971 228966447 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388824
chr1 228966223 228966243 RREB1 JASPAR yes 35933158
chr1 228966229 228966238 SOX9 JASPAR yes 35933159
chr1 228966231 228966240 SRY JASPAR yes 35933160
Genes associated with rs574429789[chr1:228966238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More