EnhancerDB
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  3. rs574488817[chr5:171610460]
Enhancers that have rs574488817[chr5:171610460]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs574488817[chr5:171610460]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171610454 171610475 IRF1 JASPAR yes 67772574
chr5 171610455 171610476 IRF1 JASPAR yes 67772575
chr5 171610456 171610471 PRDM1 JASPAR yes 67772576
chr5 171610456 171610471 STAT2 JASPAR yes 67772577
chr5 171610459 171610474 FOXP1 JASPAR yes 67772578
chr5 171610460 171610475 FOXP1 JASPAR yes 67772579
Genes associated with rs574488817[chr5:171610460], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More