EnhancerDB
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  3. rs574492896[chr12:58814468]
Enhancers that have rs574492896[chr12:58814468]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58804159 58816575 enh29596
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Lung (A549) Stomach Pancreas (Panc1) Lung (PC-9) Breast Spleen Epithelial (MCF-7)
Transcript factors that have rs574492896[chr12:58814468]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58814198 58814794 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21552003
chr12 58814204 58814674 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21552004
chr12 58814220 58814750 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21552005
chr12 58814223 58814739 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21552006
chr12 58814241 58814737 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21552007
chr12 58814245 58814721 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21552008
chr12 58814463 58814477 EBF1 JASPAR yes 121172865
chr12 58814464 58814476 TFAP2A JASPAR yes 121172866
chr12 58814464 58814476 TFAP2B JASPAR yes 121172867
chr12 58814464 58814476 TFAP2C JASPAR yes 121172868
chr12 58814464 58814479 TFAP2A JASPAR yes 121172869
chr12 58814464 58814479 TFAP2C JASPAR yes 121172870
chr12 58814466 58814475 TFAP2A JASPAR yes 121172871
Genes associated with rs574492896[chr12:58814468], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More