EnhancerDB
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  3. rs574515894[chr5:171589140]
Enhancers that have rs574515894[chr5:171589140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs574515894[chr5:171589140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171589128 171589142 RXRB JASPAR yes 67769826
chr5 171589128 171589142 RXRG JASPAR yes 67769827
chr5 171589140 171589145 TFAP2A TRANSFAC yes 67769828
chr5 171589140 171589146 MZF1 JASPAR yes 67769829
Genes associated with rs574515894[chr5:171589140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More