EnhancerDB
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  3. rs574540386[chr2:219584293]
Enhancers that have rs574540386[chr2:219584293]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 219577845 219590135 enh34275
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Lung Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr2 219584291 219584413 vista34782
VISTA
Transcript factors that have rs574540386[chr2:219584293]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 219584290 219584305 FOXP1 JASPAR yes 22211172
chr2 219584290 219584305 FOXP1 JASPAR yes 81009413
chr2 219584291 219584306 FOXP1 JASPAR yes 22211173
chr2 219584291 219584306 FOXP1 JASPAR yes 81009414
chr2 219584292 219584298 TBP TRANSFAC yes 22211174
chr2 219584292 219584298 TBP TRANSFAC yes 81009415
chr2 219584292 219584307 FOXP1 JASPAR yes 22211175
chr2 219584292 219584307 FOXP1 JASPAR yes 81009416
chr2 219584292 219584313 IRF1 JASPAR yes 22211176
chr2 219584292 219584313 IRF1 JASPAR yes 81009417
chr2 219584293 219584308 FOXP1 JASPAR yes 22211177
chr2 219584293 219584308 FOXP1 JASPAR yes 81009418
chr2 219584293 219584314 IRF1 JASPAR yes 22211178
chr2 219584293 219584314 IRF1 JASPAR yes 81009419
Genes associated with rs574540386[chr2:219584293], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More