EnhancerDB
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  3. rs5745958[chr1:12228314]
Enhancers that have rs5745958[chr1:12228314]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12227833 12229578 vista388
VISTA
chr1 12228245 12248275 enh11508
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Pancreas Uterus Thymus Heart
Transcript factors that have rs5745958[chr1:12228314]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12226757 12228845 POLR2A UCSC Txn Factor no Conserved 107802101
chr1 12228297 12228315 RARA JASPAR yes 26805293
chr1 12228297 12228315 RARA JASPAR yes 118231895
chr1 12228312 12228333 ZNF263 JASPAR yes 26805294
chr1 12228312 12228333 ZNF263 JASPAR yes 118231896
Genes associated with rs5745958[chr1:12228314], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More