EnhancerDB
  1. Home
  2. SNP
  3. rs574644967[chr17:53517218]
Enhancers that have rs574644967[chr17:53517218]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs574644967[chr17:53517218]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53516504 53517324 ZNF143 GTRD no Epithelial (MCF-7) 21772609
chr17 53516518 53517237 ZNF143 GTRD no Epithelial (MCF-7) 21772610
chr17 53517179 53517459 ZNF274 GTRD no Liver (HepG2) 21772619
chr17 53517199 53517220 IRF1 JASPAR yes 54850911
chr17 53517203 53517224 IRF1 JASPAR yes 54850913
chr17 53517205 53517220 PRDM1 JASPAR yes 54850914
chr17 53517205 53517220 STAT2 JASPAR yes 54850915
chr17 53517206 53517220 SPIC JASPAR yes 54850916
chr17 53517206 53517220 STAT1 JASPAR yes 54850917
chr17 53517207 53517228 IRF1 JASPAR yes 54850918
chr17 53517208 53517223 FOXP1 JASPAR yes 54850919
chr17 53517208 53517229 IRF1 JASPAR yes 54850920
chr17 53517209 53517230 IRF1 JASPAR yes 54850921
chr17 53517210 53517225 FOXP1 JASPAR yes 54850922
chr17 53517210 53517231 IRF1 JASPAR yes 54850923
chr17 53517211 53517232 IRF1 JASPAR yes 54850924
chr17 53517212 53517227 FOXP1 JASPAR yes 54850925
chr17 53517212 53517233 IRF1 JASPAR yes 54850926
chr17 53517213 53517228 FOXP1 JASPAR yes 54850927
chr17 53517213 53517234 IRF1 JASPAR yes 54850928
chr17 53517214 53517229 FOXP1 JASPAR yes 54850929
chr17 53517214 53517235 IRF1 JASPAR yes 54850930
chr17 53517215 53517230 FOXP1 JASPAR yes 54850931
chr17 53517215 53517236 IRF1 JASPAR yes 54850932
chr17 53517216 53517231 FOXP1 JASPAR yes 54850933
chr17 53517217 53517232 FOXP1 JASPAR yes 54850934
chr17 53517218 53517233 FOXP1 JASPAR yes 54850935
Genes associated with rs574644967[chr17:53517218], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More