EnhancerDB
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  3. rs574747858[chr1:12657036]
Enhancers that have rs574747858[chr1:12657036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12643625 12676355 enh11516
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs574747858[chr1:12657036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12657032 12657042 POU6F2 JASPAR yes 26837065
chr1 12657033 12657043 GSX1 JASPAR yes 26837066
chr1 12657033 12657043 GSX2 JASPAR yes 26837067
chr1 12657033 12657043 HOXA2 JASPAR yes 26837068
chr1 12657033 12657043 MEOX1 JASPAR yes 26837069
chr1 12657033 12657043 NOTO JASPAR yes 26837070
chr1 12657034 12657042 NKX6-1 JASPAR yes 26837071
chr1 12657034 12657042 NKX6-2 JASPAR yes 26837072
chr1 12657034 12657050 POU4F2 JASPAR yes 26837073
chr1 12657036 12657040 YY1 TRANSFAC yes 26837074
Genes associated with rs574747858[chr1:12657036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More