EnhancerDB
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  3. rs574855616[chr17:42898649]
Enhancers that have rs574855616[chr17:42898649]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42894605 42906230 enh32204
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Colon (HCT116) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus
Transcript factors that have rs574855616[chr17:42898649]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42898640 42898654 RORA JASPAR yes 54416177
chr17 42898641 42898654 DUXA JASPAR yes 54416178
chr17 42898642 42898653 DUX4 JASPAR yes 54416179
chr17 42898648 42898652 ESR1 TRANSFAC yes 54416180
Genes associated with rs574855616[chr17:42898649], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More