EnhancerDB
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  3. rs574874300[chr2:236423110]
Enhancers that have rs574874300[chr2:236423110]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs574874300[chr2:236423110]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236423103 236423112 ZEB1 JASPAR yes 81976705
chr2 236423103 236423118 SCRT1 JASPAR yes 81976706
chr2 236423104 236423114 FIGLA JASPAR yes 81976707
chr2 236423104 236423114 TCF3 JASPAR yes 81976708
chr2 236423104 236423114 TCF4 JASPAR yes 81976709
chr2 236423105 236423114 SNAI2 JASPAR yes 81976710
chr2 236423105 236423118 SCRT2 JASPAR yes 81976711
chr2 236423106 236423111 USF2 TRANSFAC yes 81976712
Genes associated with rs574874300[chr2:236423110], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More